The first all-sky maps developed by NASA’s Interstellar Boundary Explorer (IBEX) spacecraft, the initial mission to examine the global interactions occurring at the edge of the solar system, suggest that the galactic magnetic fields had a far greater impact on Earth’s history than previously conceived, and the future of our planet and others may depend, in part, on how the galactic magnetic fields change with time.

“The IBEX results are truly remarkable, with emissions not resembling any of the current theories or models of this never-before-seen region,” says Dr. David J. McComas, IBEX principal investigator and assistant vice president of the Space Science and Engineering Division at Southwest Research Institute. “We expected to see small, gradual spatial variations at the interstellar boundary, some 10 billion miles away. However, IBEX is showing us a very narrow ribbon that is two to three times brighter than anything else in the sky.”

A “solar wind” of charged particles continuously travels at supersonic speeds away from the Sun in all directions. This solar wind inflates a giant bubble in interstellar space called the heliosphere — the region of space dominated by the Sun’s influence in which the Earth and other planets reside. As the solar wind travels outward, it sweeps up newly formed “pickup ions,” which arise from the ionization of neutral particles drifting in from interstellar space. IBEX measures energetic neutral atoms (ENAs) traveling at speeds of roughly half a million to two and a half million miles per hour. These ENAs are produced from the solar wind and pick-up ions in the boundary region between the heliosphere and the local interstellar medium.

The IBEX mission just completed the first global maps of these protective layers called the heliosphere through a new technique that uses neutral atoms like light to image the interactions between electrically charged and neutral atoms at the distant reaches of our Sun’s influence, far beyond the most distant planets. It is here that the solar wind, which continually emanates from the Sun at millions of miles per hour, slams into the magnetized medium of charged particles, atoms and dust that pervades the galaxy and is diverted around the system. The interaction between the solar wind and the medium of our galaxy creates a complex host of interactions, which has long fascinated scientists, and is thought to shield the majority of harmful galactic radiation that reaches Earth and fills the solar system.

“The magnetic fields of our galaxy may change the protective layers of our solar system that regulate the entry of galactic radiation, which affects Earth and poses hazards to astronauts,” says Nathan Schwadron of Boston University’s Center for Space Physics and the lead for the IBEX Science Operations Center at BU.

Each six months, the IBEX mission, which was launched on October 18, 2008, completes its global maps of the heliosphere. The first IBEX maps are strikingly different than any of the predictions, which are now forcing scientists to reconsider their basic assumptions of how the heliosphere is created.

“The most striking feature is the ribbon that appears to be controlled by the magnetic field of our galaxy,” says Schwadron.

Although scientists knew that their models would be tested by the IBEX measurements, the existence of the ribbon is “remarkable” says Geoffrey Crew, a Research Scientist at MIT and the Software Design Lead for IBEX. “It suggests that the galactic magnetic fields are much stronger and exert far greater stresses on the heliosphere than we previously believed.”

The discovery has scientists thinking carefully about how different the heliosphere could be than they expected.

“It was really surprising that the models did not generate features at all like the ribbon we observed,” says Christina Prested, a BU graduate student working on IBEX. “Understanding the ribbon in detail will require new insights into the inner workings of the interactions at the edge of our Sun’s influence in the galaxy.”

Adds Schwadron,”Any changes to our understanding of the heliosphere will also affect how we understand the astrospheres that surround other stars. The harmful radiation that leaks into the solar system from the heliosphere is present throughout the galaxy and the existence of astrospheres may be important for understanding the habitability of planets surrounding other stars.”

IBEX is the latest in NASA’s series of low-cost, rapidly developed Small Explorers space missions. Southwest Research Institute in San Antonio, Texas, leads and developed the mission with a team of national and international partners. NASA’s Goddard Space Flight Center in Greenbelt, Md., manages the Explorers Program for NASA’s Science Mission Directorate in Washington.

Emory University researchers have identified the first fish known to have switched from ultraviolet vision to violet vision, or the ability to see blue light. The discovery is also the first example of an animal deleting a molecule to change its visual spectrum.

The scabbardfish (Lepidopus fitchi) is now the only fish known to have switched from ultraviolet to violet vision, or the ability to see blue light. (Credit: Carol Clark, Emory University)

Their findings on scabbardfish, linking molecular evolution to functional changes and the possible environmental factors driving them, were published Oct. 13 in the Proceedings of the National Academy of Sciences.

“This multi-dimensional approach strengthens the case for the importance of adaptive evolution,” says evolutionary geneticist Shozo Yokoyama, who led the study. “Building on this framework will take studies of natural selection to the next level.”

The research team included Takashi Tada, a post-doctoral fellow in biology, and Ahmet Altun, a post-doctoral fellow in biology and computational chemistry.

Vision ‘like a painting’

For two decades, Yokoyama has done groundbreaking work on the adaptive evolution of vision in vertebrates. Vision serves as a good study model, since it is the simplest of the sensory systems. For example, only four genes are involved in human vision.

“It’s amazing, but you can mix together this small number of genes and detect a whole color spectrum,” Yokoyama says. “It’s just like a painting.”

The common vertebrate ancestor possessed UV vision. However, many species, including humans, have switched from UV to violet vision, or the ability to sense the blue color spectrum.

From the ocean depths

Fish provide clues for how environmental factors can lead to such vision changes, since the available light at various ocean depths is well quantified. All fish previously studied have retained UV vision, but the Emory researchers found that the scabbardfish has not. To tease out the molecular basis for this difference, they used genetic engineering, quantum chemistry and theoretical computation to compare vision proteins and pigments from scabbardfish and another species, lampfish. The results indicated that scabbardfish shifted from UV to violet vision by deleting the molecule at site 86 in the chain of amino acids in the opsin protein.

“Normally, amino acid changes cause small structure changes, but in this case, a critical amino acid was deleted,” Yokoyama says.

More examples likely

“The finding implies that we can find more examples of a similar switch to violet vision in different fish lineages,” he adds. “Comparing violet and UV pigments in fish living in different habitats will open an unprecedented opportunity to clarify the molecular basis of phenotypic adaptations, along with the genetics of UV and violet vision.”

Scabbardfish spend much of their life at depths of 25 to 100 meters, where UV light is less intense than violet light, which could explain why they made the vision shift, Yokoyama theorizes. Lampfish also spend much of their time in deep water. But they may have retained UV vision because they feed near the surface at twilight on tiny, translucent crustaceans that are easier to see in UV light.

A framework for evolutionary biology

Last year, Yokoyama and collaborators completed a comprehensive project to track changes in the dim-light vision protein opsin in nine fish species, chameleons, dolphins and elephants, as the animals spread into new environments and diversified over time. The researchers found that adaptive changes occur by a small number of amino acid substitutions, but most substitutions do not lead to functional changes.

Their results provided a reference framework for further research, and helped bring to light the limitations of studies that rely on statistical analysis of gene sequences alone to identify adaptive mutations in proteins.

“Evolutionary biology is filled with arguments that are misleading, at best,” Yokoyama says. “To make a strong case for the mechanisms of natural selection, you have to connect changes in specific molecules with changes in phenotypes, and then you have to connect these changes to the living environment.”

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Emory University researchers have identified the first fish known to have switched from ultraviolet vision to violet vision, or the ability to see blue light. The discovery is also the first example of an animal deleting a molecule to change its visual spectrum.

The scabbardfish (Lepidopus fitchi) is now the only fish known to have switched from ultraviolet to violet vision, or the ability to see blue light. (Credit: Carol Clark, Emory University)

Their findings on scabbardfish, linking molecular evolution to functional changes and the possible environmental factors driving them, were published Oct. 13 in the Proceedings of the National Academy of Sciences.

“This multi-dimensional approach strengthens the case for the importance of adaptive evolution,” says evolutionary geneticist Shozo Yokoyama, who led the study. “Building on this framework will take studies of natural selection to the next level.”

The research team included Takashi Tada, a post-doctoral fellow in biology, and Ahmet Altun, a post-doctoral fellow in biology and computational chemistry.

Vision ‘like a painting’

For two decades, Yokoyama has done groundbreaking work on the adaptive evolution of vision in vertebrates. Vision serves as a good study model, since it is the simplest of the sensory systems. For example, only four genes are involved in human vision.

“It’s amazing, but you can mix together this small number of genes and detect a whole color spectrum,” Yokoyama says. “It’s just like a painting.”

The common vertebrate ancestor possessed UV vision. However, many species, including humans, have switched from UV to violet vision, or the ability to sense the blue color spectrum.

From the ocean depths

Fish provide clues for how environmental factors can lead to such vision changes, since the available light at various ocean depths is well quantified. All fish previously studied have retained UV vision, but the Emory researchers found that the scabbardfish has not. To tease out the molecular basis for this difference, they used genetic engineering, quantum chemistry and theoretical computation to compare vision proteins and pigments from scabbardfish and another species, lampfish. The results indicated that scabbardfish shifted from UV to violet vision by deleting the molecule at site 86 in the chain of amino acids in the opsin protein.

“Normally, amino acid changes cause small structure changes, but in this case, a critical amino acid was deleted,” Yokoyama says.

More examples likely

“The finding implies that we can find more examples of a similar switch to violet vision in different fish lineages,” he adds. “Comparing violet and UV pigments in fish living in different habitats will open an unprecedented opportunity to clarify the molecular basis of phenotypic adaptations, along with the genetics of UV and violet vision.”

Scabbardfish spend much of their life at depths of 25 to 100 meters, where UV light is less intense than violet light, which could explain why they made the vision shift, Yokoyama theorizes. Lampfish also spend much of their time in deep water. But they may have retained UV vision because they feed near the surface at twilight on tiny, translucent crustaceans that are easier to see in UV light.

A framework for evolutionary biology

Last year, Yokoyama and collaborators completed a comprehensive project to track changes in the dim-light vision protein opsin in nine fish species, chameleons, dolphins and elephants, as the animals spread into new environments and diversified over time. The researchers found that adaptive changes occur by a small number of amino acid substitutions, but most substitutions do not lead to functional changes.

Their results provided a reference framework for further research, and helped bring to light the limitations of studies that rely on statistical analysis of gene sequences alone to identify adaptive mutations in proteins.

“Evolutionary biology is filled with arguments that are misleading, at best,” Yokoyama says. “To make a strong case for the mechanisms of natural selection, you have to connect changes in specific molecules with changes in phenotypes, and then you have to connect these changes to the living environment.”

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